Tunable Patterning of DNA Origami on Surfaces Using Steric Brushes

S Wang, P A Lin, S Zauscher, G Arya, Y Ke · Angewandte Chemie International Edition, e8367703

Expanding DNA alphabet adds a previously unknown dimension to nanostructures

K Zhou, S Hoshika, J Cheng, C Lin, S Benner, Y Ke · Science Advances 12(4), eaeb6713

DNA computing function switching by programming base stacking interactions with minimal molecular architecture changes

Y Zhang, B Li, X Liu, X Zheng, S Liu, G Nie, J Yang, Y Ke, S Li, C Zhang · Nature Communications 16(1), 9369

Spring-loaded DNA origami arrays as energy-supplied hardware for modular nanorobots

M Pfeiffer, F Cole, D Wang, Y Ke, P Tinnefeld · Science Robotics 10(107), eadu3679

Emerging Research on Gene Delivery to the Nucleus via DNA Origami

S Sterling, Y Wei, G Arya, C Castro, Y Ke · JACS Au 5(9), 4155–4164

Modulating transformation of DNA origami nanoarray via sequence design

D Wang, F Cole, M Pfeiffer, M Cao, T Schröder, P Tinnefeld, Y Ke · Nature Communications 16(1), 5626

Scaffolding Light-Up Aptamers on DNA Nanostructures for Fluorescence Enhancement

L Shen, D Yang, D Fu, P Wang, Y Ke · ACS Biomaterials Science & Engineering 11(7), 4068–4075

Self-authenticating genomic materials in Escherichia coli via advanced genome signatures

Z Wang, J Cui, Q Liu, J Li, C Guo, Y Liu, C Jiang, H Xue, J Li, Y Ke, H Qi · Communications Biology 8(1), 762

Differential Sensitivity to Interepitope Spacing in Mast Cells and B Cells Enables Design of Hypoallergenic Allergen Vaccine Immunogens

B J Cossette, L Shen, A Bermudez, H Freire Haddad, S Shetty, J Sylvers, F Yuan, Y Ke, J H Collier · ACS Nano 19(16), 15371–15384

Two-Dimensional, Chiral Colloidal Superlattices Engineered with DNA Origami

B Dong, X Xu, R Guan, S Jiang, L Ma, H Hu, Y Ke, N Liu, X Lan · Nano Letters 25(14), 5705–5712

Dynamic DNA Superstructures with emergent functions

D Duke, S Sterling, T Teng, A Altunina, I V Martynenko, Y Ke, C E Castro, G Arya · Nanoscale Horizons 10(11), 2828–2840

DNA Origami Colloidal Crystals: Opportunities and Challenges

J Lee, J Kim, G Posnjak, A Ershova, D Hayakawa, W M Shih, W B Rogers, Y Ke, T Liedl, S Lee · Nano Letters 25(1), 16–27

Controlled mechanochemical coupling of anti-junctions in DNA origami arrays

F Cole, M Pfeiffer, D Wang, T Schröder, Y Ke, P Tinnefeld · Nature Communications 15(1), 7894

DNA-silica nanolattices as mechanical metamaterials

J Kulikowski, S Wang, Z Aitken, J Grimm, B S Gao, M M Wang, D Doan, A C Lee, L Y Shen, W Huang, A Devaraj, Y W Zhang, Y Ke, X W Gu · Matter 7(6), 2144–2160

Dynamic Gold Nanostructures Based on DNA Self Assembly

B Kou, Z Wang, S Mousavi, P Wang, Y Ke · Small 20(23), e2308862

Free-Standing DNA Origami Superlattice to Facilitate Cryo-EM Visualization of Membrane Vesicles

N Aissaoui, A Mills, J Lai-Kee-Him, N Triomphe, Q Cece, C Doucet, A Bonhoure, M Vidal, Y Ke, G Bellot · Journal of the American Chemical Society 146(19), 12925–12932

Mechanism of DNA origami folding elucidated by mesoscopic simulations

M DeLuca, D Duke, T Ye, M Poirier, Y Ke, C Castro, G Arya · Nature Communications 15(1), 3015

A Programmable DNAzyme for the Sensitive Detection of Nucleic Acids

C Shi, D Yang, X Ma, L Pan, Y Shao, G Arya, Y Ke, C Zhang, F Wang, X Zuo, M Li, P Wang · Angewandte Chemie International Edition 63(12), e202320179

DNA-Nanostructure-Guided Assembly of Proteins into Programmable Shapes

Q Lu, Y Xu, E Poppleton, K Zhou, P Sulc, N Stephanopoulos, Y Ke · Nano Letters 24(5), 1703–1709

Dynamic Gold Nanostructures Based on DNA Self Assembly

B Kou, Z Wang, S Mousavi, P Wang, Y Ke · Small 2023, e2308862

Controlling Silicification on DNA Origami with Polynucleotide Brushes

S Wang, P A Lin, M DeLuca, S Zauscher, G Arya, Y Ke · Journal of the American Chemical Society 146(1), 358–367

Spatiotemporal Control over Polynucleotide Brush Growth on DNA Origami Nanostructures

Y Yang, Q Lu, Y Chen, M DeLuca, G Arya, Y Ke, S Zauscher · Angewandte Chemie International Edition 62(48), e202311727

Deep inverse design of hydrophobic patches on DNA origami for mesoscale assembly of superlattices

P A Lin, S Ren, J Piland, L Collins, S Zauscher, Y Ke, G Arya · AI for Accelerated Materials Design — NeurIPS 2023 Workshop

Detection of cellular traction forces via the force-triggered Cas12a-mediated catalytic cleavage of a fluorogenic reporter strand

Y Duan, F Szlam, Y Hu, W Chen, R Li, Y Ke, R Sniecinski, K Salaita · Nature Biomedical Engineering 7(11), 1404–1418

A Spatially Programmable DNA Nanorobot Arm to Modulate Anisotropic Gold Nanoparticle Assembly by Enzymatic Excision

J Yang, Y Liang, X Li, Y Zhang, L Qian, Y Ke, C Zhang · Angewandte Chemie 62(43), e202308797

Circular single-stranded DNA as switchable vector for gene expression in mammalian cells

L Tang, Z Tian, J Cheng, Y Zhang, Y Song, Y Liu, J Wang, P Zhang, Y Ke, F C Simmel, J Song · Nature Communications 14(1), 6665

Building Large DNA Bundles via Controlled Hierarchical Assembly of DNA Tubes

Y Zhang, D Yang, P Wang, Y Ke · ACS Nano 17(11), 10486–10495

DNA origami-designed 3D phononic crystals

S H Park, H Park, J M Nam, Y Ke, T Liedl, Y Tian, S Lee · Nanophotonics 12(13), 2611–2621

Recent Advances in DNA Origami-Engineered Nanomaterials and Applications

P Zhan, A Peil, Q Jiang, D Wang, S Mousavi, Q Xiong, Q Shen, Y Shang, B Ding, C Lin, Y Ke, N Liu · Chemical Reviews 123(7), 3976–4050

Structure-Dependent Electrical Conductance of DNA Origami Nanowires

J Marrs, Q Lu, V Pan, Y Ke, J Hihath · ChemBioChem 24(2), e202200454

Unraveling mechanotransduction in T cells with DNA nanotechnology

S Sterling, Y Ke · Trends in Chemistry 5(3), 167–169

Cooperative binding of T cell receptor and CD4 to peptide-MHC enhances antigen sensitivity

M N Rushdi, V Pan, K Li, H K Choi, S Travaglino, J Hong, F Griffitts, P Agnihotri, R A Mariuzza, Y Ke, C Zhu · Nature Communications 13(1), 7055

A bistable and reconfigurable molecular system with encodable bonds

C Zhou, D Yang, S Sensale, P Sharma, D Wang, L Yu, G Arya, Y Ke, P Wang · Science Advances 8(46), eade3003

Seeded growth of adaptive tiles on DNA origami

Y Liu, J Cheng, Y Wang, B Ji, L Tang, K Zou, Y Xie, D Cui, Y Ke, J Song · Cell Reports Physical Science 3(9), 101040

Design of Uracil-Modified DNA Nanotubes for Targeted Drug Release via DNA-Modifying Enzyme Reactions

Y Deng, Y Tan, Y Zhang, L Zhang, C Zhang, Y Ke, X Su · ACS Applied Materials & Interfaces 14(30), 34470–34479

Stress in DNA Gridiron Facilitates the Formation of Two-Dimensional Crystalline Structures

L Yu, J Cheng, D Wang, V Pan, S Chang, J Song, Y Ke · Journal of the American Chemical Society 144(22), 9747–9752

DNA Assembly of Modular Components into a Rotary Nanodevice

A Peil, L Xin, S Both, L Shen, Y Ke, T Weiss, P Zhan, N Liu · ACS Nano 16(4), 5284–5291

Programmable allosteric DNA regulations for molecular networks and nanomachines

C Zhang, X Ma, X Zheng, Y Ke, K Chen, D Liu, Z Lu, J Yang, H Yan · Science Advances 8(5), eabl4589

Shaped DNA origami carrier nanopore translocation influenced by aptamer based surface modification

T Ding, J Yang, J Wang, V Pan, Z Lu, Y Ke, C Zhang · Biosensors and Bioelectronics 195, 113658

Spatiotemporal Control of Molecular Cascade Reactions by a Reconfigurable DNA Origami Domino Array

S Fan, B Ji, Y Liu, K Zou, Z Tian, B Dai, D Cui, P Zhang, Y Ke, J Song · Angewandte Chemie 61(9), e202116324

Blockade of glutamine-dependent cell survival augments antitumor efficacy of CPI-613 in head and neck cancer

L Lang, F Wang, Z Ding, X Zhao, R Loveless, J Xie, C Shay, P Qiu, Y Ke, N F Saba, Y Teng · Journal of Experimental & Clinical Cancer Research 40(1), 393

Massively Parallelized Molecular Force Manipulation with On-Demand Thermal and Optical Control

H Su, J M Brockman, Y Duan, N Sen, H Chhabra, A Bazrafshan, A T Blanchard, T Meyer, B Andrews, J P K Doye, Y Ke, R B Dyer, K Salaita · Journal of the American Chemical Society 143(46), 19466–19473

Divalent Multilinking Bonds Control Growth and Morphology of Nanopolymers

Y Xiong, Z Lin, D Mostarac, B Minevich, Q Peng, G Zhu, P A Sanchez, S Kantorovich, Y Ke, O Gang · Nano Letters 21(24), 10547–10554

Monochromatic Fluorescent Barcodes Hierarchically Assembled from Modular DNA Origami Nanorods

V Pan, W Wang, I Heaven, T Bai, Y Cheng, C Chen, Y Ke, B Wei · ACS Nano 15(10), 15892–15901

Programmable Site-Specific Functionalization of DNA Origami with Polynucleotide Brushes

Y Yang, Q Lu, C M Huang, H Qian, Y Zhang, S Deshpande, G Arya, Y Ke, S Zauscher · Angewandte Chemie 60(43), 23241–23247

Mechanically Triggered Hybridization Chain Reaction

Y Duan, R Glazier, A Bazrafshan, Y Hu, S A Rashid, B G Petrich, Y Ke, K Salaita · Angewandte Chemie 60(36), 19974–19981

DNA-Grafted 3D Superlattice Self-Assembly

S Wang, X Xie, Z Chen, N Ma, X Zhang, K Li, C Teng, Y Ke, Y Tian · International Journal of Molecular Sciences 22(14), 7558

DNA Nanotechnology-Based Biosensors and Therapeutics

L Shen, P Wang, Y Ke · Advanced Healthcare Materials 10(15), 2002205

DNA origami single crystals with Wulff shapes

Y Wang, L Dai, Z Ding, M Ji, J Liu, H Xing, X Liu, Y Ke, C Fan, P Wang, Y Tian · Nature Communications 12(1), 3011

Accurate genotyping of fragmented DNA using a toehold assisted padlock probe

Y Gao, H Qiao, V Pan, Z Wang, J Li, Y Wei, Y Ke, H Qi · Biosensors and Bioelectronics 179, 113079

High-Throughput Dielectrophoretic Trapping and Detection of DNA Origami

T Ghomian, H Jeong, V Pan, K Celik, M Alangari, Y Ke, J Hihath · Advanced Materials Interfaces 8(5), 2001476

Programmable transformations of DNA origami made of small modular dynamic units

D Wang, L Yu, C M Huang, G Arya, S Chang, Y Ke · Journal of the American Chemical Society 143(5), 2256–2263

Hierarchical Fabrication of DNA Wireframe Nanoarchitectures for Efficient Cancer Imaging and Targeted Therapy

D Wang, R Peng, Y Peng, Z Deng, F Xu, Y Su, P Wang, L Li, X Q Wang, Y Ke, W Tan · ACS Nano 14(12), 17365–17375

DNA Origami-Enabled Biosensors

S Wang, Z Zhou, N Ma, S Yang, K Li, C Teng, Y Ke, Y Tian · Sensors 20(23), 6899

DNA Origami Guided Self-Assembly of Plasmonic Polymers with Robust Long-Range Plasmonic Resonance

P Wang, J H Huh, H Park, D Yang, Y Zhang, Y Zhang, J Lee, S Lee, Y Ke · Nano Letters 20(12), 8926–8932

Low-Bias Manipulation of DNA Oligo Pool for Robust Data Storage

Y Gao, X Chen, H Qiao, Y Ke, H Qi · ACS Synthetic Biology 9(12), 3344–3352

Programming the Curvatures in Reconfigurable DNA Domino Origami by Using Asymmetric Units

D Wang, L Yu, B Ji, S Chang, J Song, Y Ke · Nano Letters 20(11), 8236–8241

Engineering Organization of DNA Nano-Chambers through Dimensionally Controlled and Multi-Sequence Encoded Differentiated Bonds

Z Lin, H Emamy, B Minevich, Y Xiong, S Xiang, S K Kumar, Y Ke, O Gang · Journal of the American Chemical Society 142(41), 17531–17542

Modular Reconfigurable DNA Origami: From Two-Dimensional to Three-Dimensional Structures

Y Liu, J Cheng, S Fan, H Ge, T Luo, L Tang, B Ji, C Zhang, D Cui, Y Ke, J Song · Angewandte Chemie 59(51), 23277–23282

Live-cell super-resolved PAINT imaging of piconewton cellular traction forces

J M Brockman, H Su, A T Blanchard, Y Duan, T Meyer, M E Quach, R Glazier, A Bazrafshan, R L Bender, A V Kellner, H Ogasawara, R Ma, F Schueder, B G Petrich, R Jungmann, R Li, A L Mattheyses, Y Ke, K Salaita · Nature Methods 17(10), 1018–1024

Proximity-Induced Pattern Operations in Reconfigurable DNA Origami Domino Array

S Fan, J Cheng, Y Liu, D Wang, T Luo, B Dai, C Zhang, D Cui, Y Ke, J Song · Journal of the American Chemical Society 142(34), 14566–14573

Interfacially Bridging Covalent Network Yields Hyperstable and Ultralong Virus-Based Fibers for Engineering Functional Materials

K Zhou, Y Zhou, H Yang, H Jin, Y Ke, Q Wang · Angewandte Chemie 59(41), 18249–18255

Programmable assembly of gold nanoparticle nanoclusters and lattices

L Shen, V Pan, H Li, Y Zhang, P Wang, Y Ke · Journal of Materials Chemistry B 8(31), 6810–6813

Information Coding in a Reconfigurable DNA Origami Domino Array

S Fan, D Wang, J Cheng, Y Liu, T Luo, D Cui, Y Ke, J Song · Angewandte Chemie 59(31), 12991–12997

Programming Surface-Enhanced Raman Scattering of DNA Origami-templated Metamolecules

C Zhou, Y Yang, H Li, F Gao, C Song, D Yang, F Xu, N Liu, Y Ke, S Su, P Wang · Nano Letters 20(5), 3155–3159

Programmable Assembly of Iron Oxide Nanoparticles Using DNA Origami

T A Meyer, C Zhang, G Bao, Y Ke · Nano Letters 20(4), 2799–2805

Programming Dynamic Assembly of Viral Proteins with DNA Origami

K Zhou, Y Zhou, V Pan, Q Wang, Y Ke · Journal of the American Chemical Society 142(13), 5929–5932

DNA nanotechnology assisted nanopore-based analysis

T Ding, J Yang, V Pan, N Zhao, Z Lu, Y Ke, C Zhang · Nucleic Acids Research 48(6), 2791–2806

Programming the Nucleation of DNA Brick Self-Assembly with a Seeding Strand

Y Zhang, A Reinhardt, P Wang, J Song, Y Ke · Angewandte Chemie 59(22), 8594–8600

Tunable DNA Origami Motors Translocate Ballistically Over μm Distances at nm/s Speeds

A Bazrafshan, T A Meyer, H Su, J M Brockman, A T Blanchard, S Piranej, Y Duan, Y Ke, K Salaita · Angewandte Chemie 59(24), 9514–9521

RNA imaging in living mice enabled by an in vivo hybridization chain reaction circuit with a tripartite DNA probe

H Wu, T T Chen, X N Wang, Y Ke, J H Jiang · Chemical Science 11(1), 62–69

Electrostatic Complementarity Drives Amyloid/Nucleic Acid Co-Assembly

A K Rha, D Das, O Taran, Y Ke, A K Mehta, D G Lynn · Angewandte Chemie 59(1), 358–363

Programming DNA Tube Circumference by Tile Offset Connection

Y Zhang, X Chen, G Kang, R Peng, V Pan, R Sundaresan, P Wang, Y Ke · Journal of the American Chemical Society 141(50), 19529–19532

DNA-Guided Assembly of Molecules, Materials, and Cells

D Yang, C Zhou, F Gao, P Wang, Y Ke · Advanced Intelligent Systems 2(1), 1900101

Nicking-Assisted Reactant Recycle to Implement Entropy-Driven DNA Circuit

C Zhang, Z Wang, Y Liu, J Yang, X Zhang, Y Li, L Pan, Y Ke, H Yan · Journal of the American Chemical Society 141(43), 17189–17197

Self-Assembly of DNA-Minocycline Complexes by Metal Ions with Controlled Drug Release

T Zhang, J Nong, N Alzahrani, Z Wang, S W Oh, T Meier, D G Yang, Y Ke, Y Zhong, J Fu · ACS Applied Materials & Interfaces 11(33), 29512–29521

Magnetic Plasmon Networks Programmed by Molecular Self-Assembly

P Wang, J H Huh, J Lee, K Kim, K J Park, S Lee, Y Ke · Advanced Materials 31(29), 1901364

Hierarchical Self-Assembly of Cholesterol-DNA Nanorods

Y Zhang, R Peng, F Xu, Y Ke · Bioconjugate Chemistry 30(7), 1845–1849

Dynamic DNA Structures

Y Zhang, V Pan, X Li, X Yang, H Li, P Wang, Y Ke · Small 15(26), 1900228

Biomimetic Compartments Scaffolded by Nucleic Acid Nanostructures

J Fu, S W Oh, K Monckton, G Arbuckle-Keil, Y Ke, T Zhang · Small 15(26), 1099256

Complex wireframe DNA nanostructures from simple building blocks

W Wang, S Chen, B An, K Huang, T Bai, M Xu, G Bellot, Y Ke, Y Xiang, B Wei · Nature Communications 10(1), 1067

Attack on the Cell Membrane: The Pointy Ends of DNA Nanostructures Lead the Way

P Wang, Y Ke · ACS Central Science 4(10), 1298–1299

Design and operation of reconfigurable two-dimensional DNA molecular arrays

D Wang, J Song, P Wang, V Pan, Y Zhang, D Cui, Y Ke · Nature Protocols 13(10), 2312

Selective in Situ Assembly of Viral Protein onto DNA Origami

K Zhou, Y Ke, Q Wang · Journal of the American Chemical Society 140(26), 8074–8077

Programmable multivalent DNA-origami tension probes for reporting cellular traction forces

P K Dutta, Y Zhang, A Blanchard, C Ge, M Rushdi, K Weiss, C Zhu, Y Ke, K Salaita · Nano Letters 18(8), 4803–4811

Advanced Cell and Tissue Biomanufacturing

K Ye, D L Kaplan, G Bao, C Bettinger, G Forgacs, C Dong, A Khademhosseini, Y Ke, K Leong, A Sambanis, W Sun, P Yin · ACS Biomaterials Science & Engineering 4(7), 2292–2307

Structural DNA Nanotechnology: Artificial Nanostructures for Biomedical Research

Y Ke, C Castro, J H Choi · Annual Review of Biomedical Engineering 20(1), 375–401

Visualization of the Cellular Uptake and Trafficking of DNA Origami Nanostructures in Cancer Cells

P Wang, M A Rahman, Z Zhao, K Weiss, C Zhang, Z Chen, S J Hurwitz, Z G Chen, D M Shin, Y Ke · Journal of the American Chemical Society 140(7), 2478–2484

Practical aspects of structural and dynamic DNA nanotechnology

P Wang, G Chatterjee, H Yan, T H LaBean, A J Turberfield, C E Castro, G Seelig, Y Ke · MRS Bulletin 42(12), 889–896

Programmable self-assembly of three-dimensional nanostructures from 10,000 unique components

L L Ong, N Hanikel, O K Yaghi, C Grun, M T Strauss, P Bron, J Lai-Kee-Him, F Schueder, B Wang, P Wang, J Y Kishi, C Myhrvold, A Zhu, R Jungmann, G Bellot, Y Ke, P Yin · Nature 552(7683), 72–77

Systemic Delivery of Bcl2-Targeting siRNA by DNA Nanoparticles Suppresses Cancer Cell Growth

M A Rahman, P Wang, Z Zhao, D Wang, S Nannapaneni, C Zhang, Z Chen, C C Griffith, S J Hurwitz, Z G Chen, Y Ke, D M Shin · Angewandte Chemie 56(50), 16023–16027

Programmable Supra-Assembly of DNA Surface Adapter for Tunable Chiral Directional Self-Assembly of Gold Nanorods

X Lan, Z Su, Y Zhou, T Meyer, Y Ke, Q Wang, W Chiu, N Liu, S Zou, H Yan, Y Liu · Angewandte Chemie 56(46), 14632–14636

Structurally Ordered Nanowire Formation from Co-Assembly of DNA Origami and Collagen-Mimetic Peptides

T Jiang, T Meyer, C Modlin, X Zou, V P Conticello, Y Ke · Journal of the American Chemical Society 139(40), 14025

Template-free reconstruction of nanomolecular structures from nanoscopy images with isotropic 3D resolution

D Salas, A Le Gall, J B Fiche, A Valeri, Y Ke, P Bron, G Bellot, M Nollmann · Proceedings of the National Academy of Sciences 114(35), 9273–9278

Reconfiguration of DNA Molecular Arrays Driven by Information Relay

J Song, Z Li, P Wang, T Meyer, C Mao, Y Ke · Science 357(6349), doi: 10.1126/science.aan3377

The Beauty and Utility of DNA Origami

P Wang, T A Meyer, V Pan, P K Dutta, Y Ke · Chem 2(3), 239

Reconfigurable Three-Dimensional Gold Nanorod Plasmonic Nanostructures Organized on DNA Origami Tripod

P Zhan, P K Dutta, P Wang, G Song, M Dai, S Zhao, Z Wang, P Yin, W Zhang, B Ding, Y Ke · ACS Nano 11(2), 1172–1179

Programming Self-Assembly of DNA Origami Honeycomb Two-Dimensional Lattices and Plasmonic Metamaterials

P Wang, S Gaitanaros, S Lee, M Bathe, W M Shih, Y Ke · Journal of the American Chemical Society 138(24), 7733

Plasmonic Toroidal Metamolecules Assembled by DNA Origami

M J Urban, P K Dutta, P Wang, X Duan, X Shen, B Ding, Y Ke, N Liu · Journal of the American Chemical Society 138(17), 5495

Regulation at a distance of biomolecular interactions using a DNA origami nanoactuator

Y Ke, T Meyer, W M Shih, G Bellot · Nature Communications 7, 10935

Programmable DNA Hydrogels Assembled from Multi-Domain DNA Strands

H Jiang, V Pan, S Vivek, E R Weeks, Y Ke · ChemBioChem 17, 1156–1162

Site-Specific Surface Functionalization of Gold Nanorods Using DNA Origami Clamps

C Shen, X Lan, X Lu, T A Meyer, W Ni, Y Ke, Q Wang · Journal of the American Chemical Society 138(6), 1764–1767

Nucleic Acid Based Nanoreactors — Toward the Study of Multienzymatic Pathways

P K Dutta, T A Meyer, Y Ke · Advanced Science, Engineering and Medicine 7(12), 1009–1018

Prescribed nanoparticle cluster architectures and low-dimensional arrays built using octahedral DNA origami frames

Y Tian, T Wang, W Liu, H Xin, H Li, Y Ke, W Shih, O Gang · Nature Nanotechnology 10(7), 637–644

Au Nanorod Helical Superstructures with Designed Chirality

X Lan, X Lu, C Shen, Y Ke, W Ni, Q Wang · Journal of the American Chemical Society 137(1), 457–462

DNA Brick Crystals with Prescribed Depth

Y Ke, L L Ong, W Sun, J Song, M Dong, W M Shih, P Yin · Nature Chemistry 6, 994–1002

Designer three-dimensional DNA architectures

Y Ke · Current Opinions in Structural Biology 27C, 122–128

Polyhedra Self-Assembled from DNA Tripods and Characterized with 3D DNA-PAINT

R Iinuma, Y Ke, R Jungmann, T Schlichthaerle, J Woehrstein, P Yin · Science 344, 65–69

DNA Origami Structures Directly Assembled from Intact Bacteriophages

P Nickels, Y Ke, R Jungmann, D Smith, M Leichsenring, W Shih, T Liedl, B Hogberg · Small 10, 1765–1769

Design Space for Complex DNA Structures

B Wei, M Dai, C Myhrvold, Y Ke, R Jungmann, P Yin · Journal of the American Chemical Society 135, 18080–18088 · 2013

Metalized DNA Nanolithography for Encoding and Transferring Spatial Information for Graphene Patterning

Z Jin, W Sun, Y Ke, C Shih, G L C Paulus, Q H Wang, B Mu, P Yin, M S Strano · Nature Communications 4, 1663–1671 · 2013

Three-Dimensional Structures Self-Assembled from DNA Bricks

Y Ke, L L Ong, W M Shih, P Yin · Science 338, 1177–1183 · 2012

Two Design Strategies for Enhancement of Multilayer-DNA-Origami Folding: Underwinding for Specific Intercalator Rescue and Staple-Break Positioning

Y Ke, G Bellot, N Voigt, E Fradkov, W Shih · Chemical Science 3, 2587–2597 · 2012

Multilayer DNA Origami Packed on Hexagonal and Hybrid Lattices

Y Ke, N V Voigt, K V Gothelf, W M Shih · Journal of the American Chemical Society 134, 1770–1774 · 2012

Multilayer DNA Origami Packed on a Square Lattice

Y Ke, S M Douglas, M Liu, J Sharma, A Cheng, A Leung, Y Liu, W M Shih, H Yan · Journal of the American Chemical Society 131, 15903–15908 · 2009

Scaffolded DNA Origami of a DNA Tetrahedron Molecular Container

Y Ke, J Sharma, M Liu, K Jahn, Y Liu, H Yan · Nano Letters 9, 2445–2447 · 2009

Controlled Delivery of DNA Origami on Patterned Surfaces

A E Gerdon, S S Oh, K Hsieh, Y Ke, H Yan, H T Soh · Small 5, 1942–1946 · 2009

Mirror Image DNA Nanostructures for Chiral Supramolecular Assemblies

C Lin, Y Ke, Z Li, J H Wang, Y Liu, H Yan · Nano Letters 9, 433–436 · 2009

Self-Assembled Water-Soluble Nucleic Acid Probe Tiles for Label-Free RNA Hybridization Assays

Y Ke, S Lindsay, Y Chang, Y Liu, H Yan · Science 319, 180–183 · 2008

Developing DNA Tiles for Oligonucleotide Hybridization Assay with Higher Accuracy and Efficiency

Y Ke, J Nangreave, H Yan, S Lindsay, Y Liu · Chemical Communications 5622–5624 · 2008

Self-assembled DNA Nanostructures for Distance-Dependent Multivalent Ligand-Protein Binding

S Rinker, Y Ke, Y Liu, R Chhabra, H Yan · Nature Nanotechnology 3, 418–422 · 2008

DNA-Tile-Directed Self-Assembly of Quantum Dots into Two-Dimensional Nanopatterns

J Sharma, Y Ke, C Lin, R Chhabra, Q Wang, J Nangreave, Y Liu, H Yan · Angewandte Chemie 47, 5157–5159 · 2008

Quantum Dot Bioconjugation during Core-Shell Synthesis

Q Wang, Y Liu, Y Ke, H Yan · Angewandte Chemie 47, 316–319 · 2008

Subtractive Assembly of DNA Nanoarchitectures Driven by Fuel Strand Displacement

Z Li, Y Ke, C Lin, H Yan, Y Liu · Chemical Communications 4318–4320 · 2008

Functional DNA Nanotube Arrays: Bottom-Up Meets Top-Down

C Lin, Y Ke, Y Liu, M Mertig, J Gu, H Yan · Angewandte Chemie 46, 6089–6092 · 2007

Spatially Addressable Multiprotein Nanoarrays Templated by Aptamer-Tagged DNA Nanoarchitectures

R Chhabra, J Sharma, Y Ke, Y Liu, S Rinker, S Lindsay, H Yan · Journal of the American Chemical Society 129, 10304–10305 · 2007

A Study of DNA Tube Formation Mechanisms Using 4-, 8-, and 12-Helix DNA Nanostructures

Y Ke, Y Liu, J Zhang, H Yan · Journal of the American Chemical Society 128, 4414–4421 · 2006

Periodic Square-Like Gold Nanoparticle Arrays Templated by Self-Assembled 2D DNA Nanogrids on a Surface

J Zhang, Y Liu, Y Ke, H Yan · Nano Letters 6, 248–251 · 2006